ADAM: A Database of Anti-Microbial peptides A comprehensive antimicrobial peptide database with sequence-structure relationships

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ADAM is a comprehensive antimicrobial peptide (AMP) database, containing 7,811 unique sequences and 759 structures. It provides researchers a rapid AMP search tool and allows them to browse through AMP sequence-structure relationships. For detailed information about ADAM, please refer to the HELP page.

Fold Clusters (structure-sequence) Infomation:

DEBUG: 搜尋關鍵字 kw = Roll

Cluster ID	PDB ID	PDB chain ID	#SEQ	Pfam Domain	CATH	SCOP
AC_004	1KJ6	A	0	Defensin_beta	[C] Alpha Beta [A] Roll [T] Antimicrobial Peptide, Beta-defensin 2; Chain A [H] Antimicrobial Peptide, Beta-defensin 2; Chain A	[C] Small proteins [F] Defensin-like [S] Defensin-like [F] Defensin
AC_010	2BWK	A	0	RnaseA	[C] Alpha Beta [A] Roll [T] P-30 Protein [H] P-30 Protein	[C] Alpha and beta proteins (a+b) [F] RNase A-like [S] RNase A-like [F] Ribonuclease A-like
AC_010	2HKY	A	0	RnaseA	[C] Alpha Beta [A] Roll [T] P-30 Protein [H] P-30 Protein	NA NA NA [F]
AC_010	2J4T	A	0	RnaseA	[C] Alpha Beta [A] Roll [T] P-30 Protein [H] P-30 Protein	NA NA NA [F]
AC_010	2VQ9	A	0	RnaseA	[C] Alpha Beta [A] Roll [T] P-30 Protein [H] P-30 Protein	NA NA NA [F]
AC_015	3IPV	A	0	Lectin_legB	[C] Mainly Beta [A] Sandwich [T] Jelly Rolls	NA NA NA [F]
AC_015	3IPV	B	0	Lectin_legB	[C] Mainly Beta [A] Sandwich [T] Jelly Rolls	NA NA NA [F]
AC_128	3EZM	A	0	CVNH	[C] Mainly Beta [A] Roll [T] HIV-inactivating Protein, Cyanovirin-n [H] HIV-inactivating Protein,Cyanovirin-n;	[C] All beta proteins [F] Cyanovirin-N [S] Cyanovirin-N [F] Cyanovirin-N
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] Antimicrobial Peptide, Beta-defensin 2; Chain A [H] Antimicrobial Peptide, Beta-defensin 2; Chain A	[C] Small proteins [F] Defensin-like [S] Defensin-like [F] Defensin
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] Antimicrobial Peptide, Beta-defensin 2; Chain A [H] Antimicrobial Peptide, Beta-defensin 2; Chain A	[C] Small proteins [F] Defensin-like [S] Defensin-like [F] Defensin
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	[C] Alpha and beta proteins (a/b) [F] Ribonuclease H-like motif [S] Ribonuclease H-like [F] Ribonuclease H
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	[C] Alpha and beta proteins (a/b) [F] Ribonuclease H-like motif [S] Ribonuclease H-like [F] Ribonuclease H
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	[C] Alpha and beta proteins (a/b) [F] Ribonuclease H-like motif [S] Ribonuclease H-like [F] Ribonuclease H
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	[C] Alpha and beta proteins (a/b) [F] Ribonuclease H-like motif [S] Ribonuclease H-like [F] Ribonuclease H
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	NA NA NA [F]
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	NA NA NA [F]
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	NA NA NA [F]
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	[C] Multi-domain proteins (alpha and beta) [F] DNA/RNA polymerases [S] DNA/RNA polymerases [F] Reverse transcriptase
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	NA NA NA [F]
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	[C] Multi-domain proteins (alpha and beta) [F] DNA/RNA polymerases [S] DNA/RNA polymerases [F] Reverse transcriptase
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	[C] Multi-domain proteins (alpha and beta) [F] DNA/RNA polymerases [S] DNA/RNA polymerases [F] Reverse transcriptase
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	NA NA NA [F]
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	NA NA NA [F]
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	[C] Multi-domain proteins (alpha and beta) [F] DNA/RNA polymerases [S] DNA/RNA polymerases [F] Reverse transcriptase
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	[C] Multi-domain proteins (alpha and beta) [F] DNA/RNA polymerases [S] DNA/RNA polymerases [F] Reverse transcriptase
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	[C] Multi-domain proteins (alpha and beta) [F] DNA/RNA polymerases [S] DNA/RNA polymerases [F] Reverse transcriptase
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	[C] Multi-domain proteins (alpha and beta) [F] DNA/RNA polymerases [S] DNA/RNA polymerases [F] Reverse transcriptase
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	NA NA NA [F]
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	NA NA NA [F]
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	[C] Multi-domain proteins (alpha and beta) [F] DNA/RNA polymerases [S] DNA/RNA polymerases [F] Reverse transcriptase
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	[C] Multi-domain proteins (alpha and beta) [F] DNA/RNA polymerases [S] DNA/RNA polymerases [F] Reverse transcriptase
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	[C] Multi-domain proteins (alpha and beta) [F] DNA/RNA polymerases [S] DNA/RNA polymerases [F] Reverse transcriptase
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	NA NA NA [F]
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	NA NA NA [F]
AC_000			0	NA	[C] Mainly Beta [A] Roll [T] SH3 type barrels.	[C] All beta proteins [F] SH3-like barrel [S] DNA-binding domain of retroviral integrase [F] DNA-binding domain of retroviral integrase
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] P-30 Protein [H] P-30 Protein	[C] Alpha and beta proteins (a+b) [F] RNase A-like [S] RNase A-like [F] Ribonuclease A-like
AC_000			0	NA	[C] Mainly Beta [A] Roll [T] Alpha-1-antitrypsin; domain 1 [H] Alpha-1-antitrypsin, domain 1	[C] Multi-domain proteins (alpha and beta) [F] Serpins [S] Serpins [F] Serpins
AC_000			0	NA	[C] Mainly Beta [A] Roll [T] Alpha-1-antitrypsin; domain 1 [H] Alpha-1-antitrypsin, domain 1	[C] Multi-domain proteins (alpha and beta) [F] Serpins [S] Serpins [F] Serpins
AC_000			0	NA	[C] Mainly Beta [A] Roll [T] Alpha-1-antitrypsin; domain 1 [H] Alpha-1-antitrypsin, domain 1	NA NA NA [F]
AC_000			0	NA	[C] Mainly Beta [A] Sandwich [T] Jelly Rolls	[C] All beta proteins [F] Concanavalin A-like lectins/glucanases [S] Concanavalin A-like lectins/glucanases [F] Legume lectins
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] Nuclear Transport Factor 2; Chain	[C] Alpha and beta proteins (a+b) [F] Cystatin-like [S] Cystatin/monellin [F] Cathelicidin motif
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] Mannose-Binding Protein A; Chain A [H] Mannose-Binding Protein A, subunit A	[C] Alpha and beta proteins (a+b) [F] C-type lectin-like [S] C-type lectin-like [F] C-type lectin domain
AC_000			0	NA	[C] Alpha Beta [A] Super Roll [T] Bactericidal permeability-increasing protein; domain 1 [H] Bactericidal permeability-increasing protein; domain 1	[C] Alpha and beta proteins (a+b) [F] Aha1/BPI domain-like [S] Bactericidal permeability-increasing protein, BPI [F] Bactericidal permeability-increasing protein, BPI
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] Ubiquitin-like (UB roll)	[C] Alpha and beta proteins (a+b) [F] RplX-like [S] RplX-like [F] RplX-like
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	[C] Multi-domain proteins (alpha and beta) [F] DNA/RNA polymerases [S] DNA/RNA polymerases [F] Reverse transcriptase
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] Ubiquitin-like (UB roll) [H] Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1	[C] Alpha and beta proteins (a+b) [F] beta-Grasp (ubiquitin-like) [S] Ubiquitin-like [F] Ubiquitin-related

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