ADAM: A Database of Anti-Microbial peptides A comprehensive antimicrobial peptide database with sequence-structure relationships

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ADAM is a comprehensive antimicrobial peptide (AMP) database, containing 7,811 unique sequences and 759 structures. It provides researchers a rapid AMP search tool and allows them to browse through AMP sequence-structure relationships. For detailed information about ADAM, please refer to the HELP page.

Fold Clusters (structure-sequence) Infomation:

DEBUG: 搜尋關鍵字 kw = Alpha Beta

Cluster ID	PDB ID	PDB chain ID	#SEQ	Pfam Domain	CATH	SCOP
AC_001	1AYJ	A	0	Gamma-thionin	[C] Alpha Beta [A] 2-Layer Sandwich [T] Defensin A-like	[C] Small proteins [F] Knottins (small inhibitors, toxins, lectins) [S] Scorpion toxin-like [F] Plant defensins
AC_001	1BK8	A	0	Gamma-thionin	[C] Alpha Beta [A] 2-Layer Sandwich [T] Defensin A-like	[C] Small proteins [F] Knottins (small inhibitors, toxins, lectins) [S] Scorpion toxin-like [F] Plant defensins
AC_001	1GPT	A	0	Gamma-thionin	[C] Alpha Beta [A] 2-Layer Sandwich [T] Defensin A-like	[C] Small proteins [F] Knottins (small inhibitors, toxins, lectins) [S] Scorpion toxin-like [F] Plant defensins
AC_001	1I2U	A	0	Toxin_3	[C] Alpha Beta [A] 2-Layer Sandwich [T] Defensin A-like	[C] Small proteins [F] Knottins (small inhibitors, toxins, lectins) [S] Scorpion toxin-like [F] Insect defensins
AC_001	1ICA	A	0	Defensin_2	[C] Alpha Beta [A] 2-Layer Sandwich [T] Defensin A-like	[C] Small proteins [F] Knottins (small inhibitors, toxins, lectins) [S] Scorpion toxin-like [F] Insect defensins
AC_001	1JKZ	A	0	Gamma-thionin	[C] Alpha Beta [A] 2-Layer Sandwich [T] Defensin A-like	[C] Small proteins [F] Knottins (small inhibitors, toxins, lectins) [S] Scorpion toxin-like [F] Plant defensins
AC_001	1L4V	A	0	Defensin_2	[C] Alpha Beta [A] 2-Layer Sandwich [T] Defensin A-like	[C] Small proteins [F] Knottins (small inhibitors, toxins, lectins) [S] Scorpion toxin-like [F] Insect defensins
AC_001	1MR4	A	0	Gamma-thionin	[C] Alpha Beta [A] 2-Layer Sandwich [T] Defensin A-like	[C] Small proteins [F] Knottins (small inhibitors, toxins, lectins) [S] Scorpion toxin-like [F] Plant defensins
AC_001	1MYN	A	0	Gamma-thionin	[C] Alpha Beta [A] 2-Layer Sandwich [T] Defensin A-like	[C] Small proteins [F] Knottins (small inhibitors, toxins, lectins) [S] Scorpion toxin-like [F] Insect defensins
AC_001	1N4N	A	0	Gamma-thionin	[C] Alpha Beta [A] 2-Layer Sandwich [T] Defensin A-like	[C] Small proteins [F] Knottins (small inhibitors, toxins, lectins) [S] Scorpion toxin-like [F] Plant defensins
AC_001	1OZZ	A	0	Toxin_3	[C] Alpha Beta [A] 2-Layer Sandwich [T] Defensin A-like	[C] Small proteins [F] Knottins (small inhibitors, toxins, lectins) [S] Scorpion toxin-like [F] Insect defensins
AC_001	1TI5	A	0	Gamma-thionin	[C] Alpha Beta [A] 2-Layer Sandwich [T] Defensin A-like	NA NA NA [F]
AC_001	2GL1	A	0	Gamma-thionin	[C] Alpha Beta [A] 2-Layer Sandwich [T] Defensin A-like	NA NA NA [F]
AC_001	2KGQ	A	0	NA	[C] Alpha Beta [A] 2-Layer Sandwich [T] Defensin A-like	NA NA NA [F]
AC_004	1KJ6	A	0	Defensin_beta	[C] Alpha Beta [A] Roll [T] Antimicrobial Peptide, Beta-defensin 2; Chain A [H] Antimicrobial Peptide, Beta-defensin 2; Chain A	[C] Small proteins [F] Defensin-like [S] Defensin-like [F] Defensin
AC_008	1BHP	A	0	Thionin	[C] Alpha Beta [A] 2-Layer Sandwich [T] Crambin	[C] Small proteins [F] Crambin-like [S] Crambin-like [F] Crambin-like
AC_008	1ED0	A	0	Thionin	[C] Alpha Beta [A] 2-Layer Sandwich [T] Crambin	[C] Small proteins [F] Crambin-like [S] Crambin-like [F] Crambin-like
AC_008	1JMN	A	0	Thionin	[C] Alpha Beta [A] 2-Layer Sandwich [T] Crambin	[C] Small proteins [F] Crambin-like [S] Crambin-like [F] Crambin-like
AC_008	1JMP	A	0	Thionin	[C] Alpha Beta [A] 2-Layer Sandwich [T] Crambin	[C] Small proteins [F] Crambin-like [S] Crambin-like [F] Crambin-like
AC_008	1ORL	A	0	Thionin	[C] Alpha Beta [A] 2-Layer Sandwich [T] Crambin	[C] Small proteins [F] Crambin-like [S] Crambin-like [F] Crambin-like
AC_008	2PLH	A	0	Thionin	[C] Alpha Beta [A] 2-Layer Sandwich [T] Crambin	[C] Small proteins [F] Crambin-like [S] Crambin-like [F] Crambin-like
AC_010	2BWK	A	0	RnaseA	[C] Alpha Beta [A] Roll [T] P-30 Protein [H] P-30 Protein	[C] Alpha and beta proteins (a+b) [F] RNase A-like [S] RNase A-like [F] Ribonuclease A-like
AC_010	2HKY	A	0	RnaseA	[C] Alpha Beta [A] Roll [T] P-30 Protein [H] P-30 Protein	NA NA NA [F]
AC_010	2J4T	A	0	RnaseA	[C] Alpha Beta [A] Roll [T] P-30 Protein [H] P-30 Protein	NA NA NA [F]
AC_010	2VQ9	A	0	RnaseA	[C] Alpha Beta [A] Roll [T] P-30 Protein [H] P-30 Protein	NA NA NA [F]
AC_013	1BLF	A	0	NA	[C] Alpha Beta [A] 3-Layer(aba) Sandwich [T] D-Maltodextrin-Binding Protein; domain 2 [H] Periplasmic binding protein-like II	[C] Alpha and beta proteins (a/b) [F] Periplasmic binding protein-like II [S] Periplasmic binding protein-like II [F] Transferrin
AC_013	1CB6	A	0	Transferrin	[C] Alpha Beta [A] 3-Layer(aba) Sandwich [T] D-Maltodextrin-Binding Protein; domain 2 [H] Periplasmic binding protein-like II	[C] Alpha and beta proteins (a/b) [F] Periplasmic binding protein-like II [S] Periplasmic binding protein-like II [F] Transferrin
AC_013	1LFG	A	0	NA	[C] Alpha Beta [A] 3-Layer(aba) Sandwich [T] D-Maltodextrin-Binding Protein; domain 2 [H] Periplasmic binding protein-like II	[C] Alpha and beta proteins (a/b) [F] Periplasmic binding protein-like II [S] Periplasmic binding protein-like II [F] Transferrin
AC_018	1P9Z	A	0	Chitin_bind_1	[C] Alpha Beta [A] 2-Layer Sandwich [T] Wheat Germ Agglutinin (Isolectin 2); domain 1	[C] Small proteins [F] Knottins (small inhibitors, toxins, lectins) [S] Plant lectins/antimicrobial peptides [F] Hevein-like agglutinin (lectin) domain
AC_018	2LB7	A	0	Chitin_bind_1	[C] Alpha Beta [A] 2-Layer Sandwich [T] Wheat Germ Agglutinin (Isolectin 2); domain 1	NA NA NA [F]
AC_032	1CFE	A	0	CAP	[C] Alpha Beta [A] 3-Layer(aba) Sandwich [T] Pathogenesis-related Protein p14a [H] Pathogenesis-related Protein p14a	[C] Alpha and beta proteins (a+b) [F] PR-1-like [S] PR-1-like [F] PR-1-like
AC_000			0	NA	[C] Alpha Beta [A] 2-Layer Sandwich [T] Defensin A-like	[C] Small proteins [F] Knottins (small inhibitors, toxins, lectins) [S] Scorpion toxin-like [F] Plant defensins
AC_000			0	NA	[C] Alpha Beta [A] 2-Layer Sandwich [T] Defensin A-like	NA NA NA [F]
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] Antimicrobial Peptide, Beta-defensin 2; Chain A [H] Antimicrobial Peptide, Beta-defensin 2; Chain A	[C] Small proteins [F] Defensin-like [S] Defensin-like [F] Defensin
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] Antimicrobial Peptide, Beta-defensin 2; Chain A [H] Antimicrobial Peptide, Beta-defensin 2; Chain A	[C] Small proteins [F] Defensin-like [S] Defensin-like [F] Defensin
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	[C] Alpha and beta proteins (a/b) [F] Ribonuclease H-like motif [S] Ribonuclease H-like [F] Ribonuclease H
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	[C] Alpha and beta proteins (a/b) [F] Ribonuclease H-like motif [S] Ribonuclease H-like [F] Ribonuclease H
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	[C] Alpha and beta proteins (a/b) [F] Ribonuclease H-like motif [S] Ribonuclease H-like [F] Ribonuclease H
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	[C] Alpha and beta proteins (a/b) [F] Ribonuclease H-like motif [S] Ribonuclease H-like [F] Ribonuclease H
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	NA NA NA [F]
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	NA NA NA [F]
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	NA NA NA [F]
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	[C] Multi-domain proteins (alpha and beta) [F] DNA/RNA polymerases [S] DNA/RNA polymerases [F] Reverse transcriptase
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	NA NA NA [F]
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	[C] Multi-domain proteins (alpha and beta) [F] DNA/RNA polymerases [S] DNA/RNA polymerases [F] Reverse transcriptase
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	[C] Multi-domain proteins (alpha and beta) [F] DNA/RNA polymerases [S] DNA/RNA polymerases [F] Reverse transcriptase
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	NA NA NA [F]
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	NA NA NA [F]
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	[C] Multi-domain proteins (alpha and beta) [F] DNA/RNA polymerases [S] DNA/RNA polymerases [F] Reverse transcriptase
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	[C] Multi-domain proteins (alpha and beta) [F] DNA/RNA polymerases [S] DNA/RNA polymerases [F] Reverse transcriptase
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	[C] Multi-domain proteins (alpha and beta) [F] DNA/RNA polymerases [S] DNA/RNA polymerases [F] Reverse transcriptase
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	[C] Multi-domain proteins (alpha and beta) [F] DNA/RNA polymerases [S] DNA/RNA polymerases [F] Reverse transcriptase
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	NA NA NA [F]
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	NA NA NA [F]
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	[C] Multi-domain proteins (alpha and beta) [F] DNA/RNA polymerases [S] DNA/RNA polymerases [F] Reverse transcriptase
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	[C] Multi-domain proteins (alpha and beta) [F] DNA/RNA polymerases [S] DNA/RNA polymerases [F] Reverse transcriptase
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	[C] Multi-domain proteins (alpha and beta) [F] DNA/RNA polymerases [S] DNA/RNA polymerases [F] Reverse transcriptase
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	NA NA NA [F]
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	NA NA NA [F]
AC_000			0	NA	[C] Alpha Beta [A] 2-Layer Sandwich [T] Nucleotidyltransferase; domain 5	[C] Alpha and beta proteins (a/b) [F] Ribonuclease H-like motif [S] Ribonuclease H-like [F] Retroviral integrase, catalytic domain
AC_000			0	NA	[C] Alpha Beta [A] 2-Layer Sandwich [T] Nucleotidyltransferase; domain 5	[C] Alpha and beta proteins (a/b) [F] Ribonuclease H-like motif [S] Ribonuclease H-like [F] Retroviral integrase, catalytic domain
AC_000			0	NA	[C] Alpha Beta [A] 2-Layer Sandwich [T] Nucleotidyltransferase; domain 5	[C] Alpha and beta proteins (a/b) [F] Ribonuclease H-like motif [S] Ribonuclease H-like [F] Retroviral integrase, catalytic domain
AC_000			0	NA	[C] Alpha Beta [A] 2-Layer Sandwich [T] Nucleotidyltransferase; domain 5	[C] Alpha and beta proteins (a/b) [F] Ribonuclease H-like motif [S] Ribonuclease H-like [F] Retroviral integrase, catalytic domain
AC_000			0	NA	[C] Alpha Beta [A] 2-Layer Sandwich [T] Nucleotidyltransferase; domain 5	[C] Alpha and beta proteins (a/b) [F] Ribonuclease H-like motif [S] Ribonuclease H-like [F] Retroviral integrase, catalytic domain
AC_000			0	NA	[C] Alpha Beta [A] 2-Layer Sandwich [T] Nucleotidyltransferase; domain 5	[C] Alpha and beta proteins (a/b) [F] Ribonuclease H-like motif [S] Ribonuclease H-like [F] Retroviral integrase, catalytic domain
AC_000			0	NA	[C] Alpha Beta [A] 2-Layer Sandwich [T] Nucleotidyltransferase; domain 5	[C] Alpha and beta proteins (a/b) [F] Ribonuclease H-like motif [S] Ribonuclease H-like [F] Retroviral integrase, catalytic domain
AC_000			0	NA	[C] Alpha Beta [A] 2-Layer Sandwich [T] Crambin	[C] Small proteins [F] Crambin-like [S] Crambin-like [F] Crambin-like
AC_000			0	NA	[C] Alpha Beta [A] 2-Layer Sandwich [T] Crambin	[C] Small proteins [F] Crambin-like [S] Crambin-like [F] Crambin-like
AC_000			0	NA	[C] Alpha Beta [A] 2-Layer Sandwich [T] Crambin	[C] Small proteins [F] Crambin-like [S] Crambin-like [F] Crambin-like
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] P-30 Protein [H] P-30 Protein	[C] Alpha and beta proteins (a+b) [F] RNase A-like [S] RNase A-like [F] Ribonuclease A-like
AC_000			0	NA	[C] Alpha Beta [A] 3-Layer(aba) Sandwich [T] D-Maltodextrin-Binding Protein; domain 2 [H] Periplasmic binding protein-like II	[C] Alpha and beta proteins (a/b) [F] Periplasmic binding protein-like II [S] Periplasmic binding protein-like II [F] Transferrin
AC_000			0	NA	[C] Alpha Beta [A] 3-Layer(aba) Sandwich [T] Aminopeptidase	[C] Alpha and beta proteins (a+b) [F] Acyl-CoA N-acyltransferases (Nat) [S] Acyl-CoA N-acyltransferases (Nat) [F] N-acetyl transferase, NAT
AC_000			0	NA	[C] Alpha Beta [A] 2-Layer Sandwich [T] Nucleotidyltransferase; domain 5	[C] Alpha and beta proteins (a/b) [F] Ribonuclease H-like motif [S] Ribonuclease H-like [F] Ribonuclease H
AC_000			0	NA	[C] Alpha Beta [A] 2-Layer Sandwich [T] Nucleotidyltransferase; domain 5	[C] Alpha and beta proteins (a/b) [F] Ribonuclease H-like motif [S] Ribonuclease H-like [F] Ribonuclease H
AC_000			0	NA	[C] Alpha Beta [A] 2-Layer Sandwich [T] Alpha-Beta Plaits	[C] Alpha and beta proteins (a+b) [F] Ferredoxin-like [S] Ribosomal protein S10 [F] Ribosomal protein S10
AC_000			0	NA	[C] Alpha Beta [A] 2-Layer Sandwich [T] Wheat Germ Agglutinin (Isolectin 2); domain 1	[C] Small proteins [F] Knottins (small inhibitors, toxins, lectins) [S] Plant lectins/antimicrobial peptides [F] Hevein-like agglutinin (lectin) domain
AC_000			0	NA	[C] Alpha Beta [A] 3-Layer(aba) Sandwich [T] Lysozyme-like [H] Lysozyme	[C] Alpha and beta proteins (a+b) [F] N-acetylmuramoyl-L-alanine amidase-like [S] N-acetylmuramoyl-L-alanine amidase-like [F] N-acetylmuramoyl-L-alanine amidase-like
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] Nuclear Transport Factor 2; Chain	[C] Alpha and beta proteins (a+b) [F] Cystatin-like [S] Cystatin/monellin [F] Cathelicidin motif
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] Mannose-Binding Protein A; Chain A [H] Mannose-Binding Protein A, subunit A	[C] Alpha and beta proteins (a+b) [F] C-type lectin-like [S] C-type lectin-like [F] C-type lectin domain
AC_000			0	NA	[C] Alpha Beta [A] Super Roll [T] Bactericidal permeability-increasing protein; domain 1 [H] Bactericidal permeability-increasing protein; domain 1	[C] Alpha and beta proteins (a+b) [F] Aha1/BPI domain-like [S] Bactericidal permeability-increasing protein, BPI [F] Bactericidal permeability-increasing protein, BPI
AC_000			0	NA	[C] Alpha Beta [A] 2-Layer Sandwich [T] Dihydrodipicolinate Reductase; domain 2 [H] Dihydrodipicolinate Reductase; domain 2	[C] Alpha and beta proteins (a/b) [F] NAD(P)-binding Rossmann-fold domains [S] NAD(P)-binding Rossmann-fold domains [F] Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] Ubiquitin-like (UB roll)	[C] Alpha and beta proteins (a+b) [F] RplX-like [S] RplX-like [F] RplX-like
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] HIV Type 1 Reverse Transcriptase; Chain A, domain 1 [H] HIV Type 1 Reverse Transcriptase, subunit A, domain 1	[C] Multi-domain proteins (alpha and beta) [F] DNA/RNA polymerases [S] DNA/RNA polymerases [F] Reverse transcriptase
AC_000			0	NA	[C] Alpha Beta [A] 3-Layer(aba) Sandwich [T] D-Maltodextrin-Binding Protein; domain 2 [H] Periplasmic binding protein-like II	NA NA NA [F]
AC_000			0	NA	[C] Alpha Beta [A] Roll [T] Ubiquitin-like (UB roll) [H] Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1	[C] Alpha and beta proteins (a+b) [F] beta-Grasp (ubiquitin-like) [S] Ubiquitin-like [F] Ubiquitin-related

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